BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H06LP1|AL427536
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1107 0.0
3x_Contig421 344 2e-94
>3x_Contig1793
Length = 40499
Score = 1107 bits (557), Expect = 0.0
Identities = 594/603 (98%), Gaps = 4/603 (0%)
Strand = Plus / Plus
Query: 363 ataaggatagaactagatatgacagactaaacaaaaggatgggatggaacgattcttcag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ataaggatagaactagatatgacagactaaacaaaaggatgggatggaacgattcttcag 61
Query: 423 atgggtctgaatgagctttaaattctacaaatatgttatatatatgatgtcatttcatgt 482
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 62 atgggtctgaatgagctttaaattctacaaatatgtaataaatatgatgtcatttcatgt 121
Query: 483 gatgtcctcttctcatcacattttttcttactttccatacgtgttcatgtctcttctttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gatgtcctcttctcatcacattttttcttactttccatacgtgttcatgtctcttctttt 181
Query: 543 ggtaaagagaaacgtatggaatatcaacttcacttttgaatatgccattatttgggtata 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggtaaagagaaacgtatggaatatcaacttcacttttgaatatgccattatttgggtata 241
Query: 603 actcgcagatgggtgtttccgtctttccacgtactaagacccatttgttttccgtttctc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actcgcagatgggtgtttccgtctttccacgtactaagacccatttgttttccgtttctc 301
Query: 663 ttaaggcccgaaagaggttctcaggaatatacatgtagatgagggactgttcaagatcaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttaaggcccgaaagaggttctcaggaatatacatgtagatgagggactgttcaagatcaa 361
Query: 723 tagaatgaatcaaagcaagtsccacaaattcagtgttaatttttgagtaattcttcatca 782
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagaatgaatcaaagcaagtcccacaaattcagtgttaatttttgagtaattcttcatca 421
Query: 783 ctgggaatatgcccttgaatagcacgtctgggggtactatctgccctatgaagagcaacg 842
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 ctgggaatatgcccttgaatagcacgtct-ggggtactatctgccctatgaagagcaacg 480
Query: 843 accgtyccatctaaagatagtttgatatcatcgtgatacaaagagctattggaatattgg 902
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accgtcccatctaaagatagtttgatatcatcgtgatacaaagagctattggaatattgg 540
Query: 903 ag-aactc-aaaccaactataccgcggttgccaatagaagtwagttgagg-ttctgcatg 959
|| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 541 agaaactcaaaaccaactataccgcggttgccaatagaagttagttgaggtttctgcatg 600
Query: 960 acc 962
|||
Sbjct: 601 acc 603
>3x_Contig421
Length = 2105
Score = 344 bits (173), Expect = 2e-94
Identities = 192/196 (97%), Gaps = 3/196 (1%)
Strand = Plus / Plus
Query: 12 aaacccttttcatagaattaccaaatttcgaagaaaagagatcgatattatgagaacttt 71
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1913 aaacccttttcatagaattaccaaatttcgaagaaaagg--tcgatattatgagaacttt 1970
Query: 72 gattagatcaaacggaactccaattgcagacgacgtagatataaacaggattgttaatga 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 gattagatcaaacggaactccaattgcagacgacgtagatataaacaggattgttaatga 2030
Query: 132 tgaacagttgcaagaacttttcgggtgcagatatcgccgcactggtccgagaatcatccg 191
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 tgaac-gttgcaagaacttttcgggtgcagatatcgccgcactggtccgagaatcatccg 2089
Query: 192 tcctggctctcaaacg 207
||||||||||||||||
Sbjct: 2090 tcctggctctcaaacg 2105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7744
Number of Sequences: 1807
Number of extensions: 7744
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)